| Protein ZmNAC17 | |
|---|---|
|
ZmNAC17 is a protein in the NAC family.
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| Information | |
| TF Name: | ZmNAC17 |
| Species: | Maize |
| TF Family: | NAC |
| Gene Name(Synonym): | NACTF17 |
| Uniprot ID: | B4FLY4 |
Protein ZmNAC17
ZmNAC17 is a protein in the NAC family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF02365 | |
| Zm00001eb185110_T001 |  |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d051140 | DAPseq |  |
sequence | fimo | position |
| Zm00001d051140 | DAPseq |  |
sequence | fimo | position |
| Zm00001d051140 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d051140 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmNAC17 is the regulator
Interactions where ZmNAC17 is the target
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Zm00001eb185110_T001 from maize genome v5
Amino Acid Sequence
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MALREIESTLPPGFRFYPSDEELVCHYLHKKVANERIAQGTLVEVDLHAREPWELPEVAKLTATEWYFFSFRDRKYATGS
RTNRATRTGYWKATGKDREVRSSSSATAVVVGMRKTLVFYRGRAPNGVKSGWVMHEFRLDTPHSPPREDWVLCRVFQKTK
AADGDGDGGAQDGDSSSPPAAFTGPSRPRAVSEPPDHSAPPAGGGYYYGLAFGPRQVEVAQQQCYGGGGATVADHHHGFT
RDSGGAAGFGATWGGGVAGGECGAGYLDMDGAFDVMMAGCFGGGDMDEFPQVWR
MALREIESTLPPGFRFYPSDEELVCHYLHKKVANERIAQGTLVEVDLHAREPWELPEVAKLTATEWYFFSFRDRKYATGS
RTNRATRTGYWKATGKDREVRSSSSATAVVVGMRKTLVFYRGRAPNGVKSGWVMHEFRLDTPHSPPREDWVLCRVFQKTK
AADGDGDGGAQDGDSSSPPAAFTGPSRPRAVSEPPDHSAPPAGGGYYYGLAFGPRQVEVAQQQCYGGGGATVADHHHGFT
RDSGGAAGFGATWGGGVAGGECGAGYLDMDGAFDVMMAGCFGGGDMDEFPQVWR
MALREIESTLPPGFRFYPSDEELVCHYLHKKVANERIAQGTLVEVDLHAREPWELPEVAKLTATEWYFFSFRDRKYATGS
RTNRATRTGYWKATGKDREVRSSSSATAVVVGMRKTLVFYRGRAPNGVKSGWVMHEFRLDTPHSPPREDWVLCRVFQKTK
AADGDGDGGAQDGDSSSPPAAFTGPSRPRAVSEPPDHSAPPAGGGYYYGLAFGPRQVEVAQQQCYGGGGATVADHHHGFT
RDSGGAAGFGATWGGGVAGGECGAGYLDMDGAFDVMMAGCFGGGDMDEFPQVWR
MALREIESTLPPGFRFYPSDEELVCHYLHKKVANERIAQGTLVEVDLHAREPWELPEVAKLTATEWYFFSFRDRKYATGS
RTNRATRTGYWKATGKDREVRSSSSATAVVVGMRKTLVFYRGRAPNGVKSGWVMHEFRLDTPHSPPREDWVLCRVFQKTK
AADGDGDGGAQDGDSSSPPAAFTGPSRPRAVSEPPDHSAPPAGGGYYYGLAFGPRQVEVAQQQCYGGGGATVADHHHGFT
RDSGGAAGFGATWGGGVAGGECGAGYLDMDGAFDVMMAGCFGGGDMDEFPQVWR
MALREIESTLPPGFRFYPSDEELVCHYLHKKVANERIAQGTLVEVDLHAREPWELPEVAKLTATEWYFFSFRDRKYATGS
RTNRATRTGYWKATGKDREVRSSSSATAVVVGMRKTLVFYRGRAPNGVKSGWVMHEFRLDTPHSPPREDWVLCRVFQKTK
AADGDGDGGAQDGDSSSPPAAFTGPSRPRAVSEPPDHSAPPAGGGYYYGLAFGPRQVEVAQQQCYGGGGATVADHHHGFT
RDSGGAAGFGATWGGGVAGGECGAGYLDMDGAFDVMMAGCFGGGDMDEFPQVWR
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF02365 |
|
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Nucleotide Sequence
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GCTAGAGCCAAGTAGCTAGAGCCAA...
GCTAGAGCCAAGTAGCTAGAGCCAAGTAGCCTCCTCTATATAACGGAGTTCCCTCGCGACCAACTCCGGTCACACACATACTTGTTGTATACCGCCTTTGTTCGGAGAGAATCATCGAGTCGGATAGAGTCCAGGGCTCCAGGCGCTGCGTACTGATCGAAGAGGCGTGTCTCTTCGATCGACCTCCAGGCTTCCAGCTAGCTAGCTAGCGAGCGATGGCATTGAGGGAGATCGAGTCGACGCTGCCACCGGGGTTCAGGTTCTACCCGAGCGACGAGGAGCTGGTGTGCCACTACCTCCACAAGAAGGTGGCCAACGAGCGCATCGCGCAGGGGACGCTCGTCGAGGTGGACCTGCACGCCCGCGAGCCGTGGGAGCTCCCAGAGGTGGCGAAGCTGACGGCCACCGAGTGGTACTTCTTCAGCTTCCGGGACCGCAAGTACGCCACGGGGTCGCGCACCAACCGCGCCACCAGGACGGGCTACTGGAAGGCCACGGGCAAGGACCGCGAGGTGCGCAGCAGCAGCAGCGCCACCGCCGTCGTCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGGGGCAGGGCCCCCAACGGCGTCAAGTCCGGCTGGGTCATGCACGAGTTCCGCCTCGACACCCCGCATTCGCCGCCAAGGGAGGACTGGGTGCTGTGCAGGGTGTTCCAGAAGACGAAAGCCGCCGACGGCGACGGCGATGGCGGCGCCCAAGACGGCGACTCCTCGTCCCCGCCGGCCGCCTTCACCGGCCCGTCACGGCCACGCGCCGTGTCAGAGCCGCCGGACCATTCCGCGCCGCCGGCGGGAGGAGGCTACTACTACGGCCTCGCGTTCGGGCCGCGGCAGGTGGAGGTGGCGCAGCAGCAGTGTTACGGCGGCGGCGGCGCCACGGTCGCCGACCACCACCACGGCTTCACGCGAGACAGCGGGGGCGCTGCAGGGTTTGGCGCGACGTGGGGAGGAGGAGTCGCCGGCGGTGAGTGCGGGGCTGGCTACCTCGATATGGACGGCGCCTTTGACGTCATGATGGCCGGCTGCTTTGGCGGTGGAGACATGGATGAGTTCCCTCAAGTGTGGAGGTGATCGATTGGGCAACGTCACGGGGTTATTACCATCCTCTTCAAAGAGGAGAATACATATTGTTCTTACTGGAGACACTGGGTCAGTTAAATCTATTGGTTGTTTAATACACATGGGGATTGGCTGGTAGATTAGAATGGGTTTGAAATGCTGTGAGCTTGACAAGGTTCATTGTGAACGTGAACTATCAGATGTAAATTAATTGGGAAATCCTTTCTTTTCTATATTA
GRMZM2G062009_T01 from maize genome v3
Amino Acid Sequence
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MALREIESTLPPGFRFYPSDEELVCHYLHKKVANERIAQGTLVEVDLHAREPWELPEVAKLTATEWYFFSFRDRKYATGS
RTNRATRTGYWKATGKDREVRSSSSATAVVVGMRKTLVFYRGRAPNGVKSGWVMHEFRLDTPHSPPREDWVLCRVFQKTK
AADGDGDGGAQDGDSSSPPAAFTGPSRPRAVSEPPDHSAPPAGGGYYYGLAFGPRQVEVAQQQCYGGGGATVADHHHGFT
RDSGGAAGFGATWGGGVAGGECGAGYLDMDGAFDVMMAGCFGGGDMDEFPQVWR
Nucleotide Sequence
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ACACACATACTTGTTGTATACCGCC...
ACACACATACTTGTTGTATACCGCCTTTGTTCGGAGAGAATCATCGAGTCGGATAGAGTCCAGGGCTCCAGGCGCTGCGTACTGATCGAAGAGGCGTGTCTCTTCGATCGACCTCCAGGCTTCCAGCTAGCTAGCTAGCGAGCGATGGCATTGAGGGAGATCGAGTCGACGCTGCCACCGGGGTTCAGGTTCTACCCGAGCGACGAGGAGCTGGTGTGCCACTACCTCCACAAGAAGGTGGCCAACGAGCGCATCGCGCAGGGGACGCTCGTCGAGGTGGACCTGCACGCCCGCGAGCCGTGGGAGCTCCCAGAGGTGGCGAAGCTGACGGCCACCGAGTGGTACTTCTTCAGCTTCCGGGACCGCAAGTACGCCACGGGGTCGCGCACCAACCGCGCCACCAGGACGGGCTACTGGAAGGCCACGGGCAAGGACCGCGAGGTGCGCAGCAGCAGCAGCGCCACCGCCGTCGTCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGGGGCAGGGCCCCCAACGGCGTCAAGTCCGGCTGGGTCATGCACGAGTTCCGCCTCGACACCCCGCATTCGCCGCCAAGGGAGGACTGGGTGCTGTGCAGGGTGTTCCAGAAGACGAAAGCCGCCGACGGCGACGGCGATGGCGGCGCCCAAGACGGCGACTCCTCGTCCCCGCCGGCCGCCTTCACCGGCCCGTCACGGCCACGCGCCGTGTCAGAGCCGCCGGACCATTCCGCGCCGCCGGCGGGAGGAGGCTACTACTACGGCCTCGCGTTCGGGCCGCGGCAGGTGGAGGTGGCGCAGCAGCAGTGTTACGGCGGCGGCGGCGCCACGGTCGCCGACCACCACCACGGCTTCACGCGAGACAGCGGGGGCGCTGCAGGGTTTGGCGCGACGTGGGGAGGAGGAGTCGCCGGCGGTGAGTGCGGGGCTGGCTACCTCGATATGGACGGCGCCTTTGACGTCATGATGGCCGGCTGCTTTGGCGGTGGAGACATGGATGAGTTCCCTCAAGTGTGGAGGTGATCGATTGGGCAACGTCACGGGGTTATTACCATCCTCTTCAAAGAGGAGAATACATATTGTTCTTACTGGAGACACTGGGTCAGTTAAATCTATTGGTTGTTTAATACACATGGGGATTGGCTGGTAGATTAGAATGGGTTTGAAATGCTGTGAGCTTGACAAGGTTCATTGTGAACGTGAACTATCAGATGTAAATTAATTGGGAAATCCTTTCTTTTCTATATTATTTAGTGTATACAGTTAATTGATAATTGTGCACGTAAAATATTCTATATGCACTGCCGGAATTTGGTTC
GRMZM2G062009_T02 from maize genome v3
Amino Acid Sequence
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MRKTLVFYRGRAPNGVKSGWVMHEFRLDTPHSPPREDWVLCRVFQKTKAADGDGDGGAQDGDSSSPPAAFTGPSRPRAVS
EPPDHSAPPAGGGYYYGLAFGPRQVEVAQQQCYGGGGATVADHHHGFTRDSGGAAGFGATWGGGVAGGECGAGYLDMDGA
FDVMMAGCFGGGDMDEFPQVWR
Nucleotide Sequence
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ACACACATACTTGTTGTATACCGCC...
ACACACATACTTGTTGTATACCGCCTTTGTTCGGAGAGAATCATCGAGTCGGATAGAGTCCAGGGCTCCAGGCGCTGCGTACTGATCGAAGAGGCGTGTCTCTTCGATCGACCTCCAGGCTTCCAGCTAGCTAGCTAGCGAGCGATGGCATTGAGGGAGATCGAGTCGACGCTGCCACCGGGGTTCAGGTTCTACCCGAGCGACGAGGAGCTGGTGTGCCACTACCTCCACAAGAAGGTGGCCAACGAGCGCATCGCGCAGGGGACGCTCGTCGAGGTGGACCTGCACGCCCGCGAGCCGTGGGAGCTCCCAGGTCAGTTCAGGTGGCGAAGCTGACGGCCACCGAGTGGTACTTCTTCAGCTTCCGGGACCGCAAGTACGCCACGGGGTCGCGCACCAACCGCGCCACCAGGACGGGCTACTGGAAGGCCACGGGCAAGGACCGCGAGGTGCGCAGCAGCAGCAGCGCCACCGCCGTCGTCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGGGGCAGGGCCCCCAACGGCGTCAAGTCCGGCTGGGTCATGCACGAGTTCCGCCTCGACACCCCGCATTCGCCGCCAAGGGAGGACTGGGTGCTGTGCAGGGTGTTCCAGAAGACGAAAGCCGCCGACGGCGACGGCGATGGCGGCGCCCAAGACGGCGACTCCTCGTCCCCGCCGGCCGCCTTCACCGGCCCGTCACGGCCACGCGCCGTGTCAGAGCCGCCGGACCATTCCGCGCCGCCGGCGGGAGGAGGCTACTACTACGGCCTCGCGTTCGGGCCGCGGCAGGTGGAGGTGGCGCAGCAGCAGTGTTACGGCGGCGGCGGCGCCACGGTCGCCGACCACCACCACGGCTTCACGCGAGACAGCGGGGGCGCTGCAGGGTTTGGCGCGACGTGGGGAGGAGGAGTCGCCGGCGGTGAGTGCGGGGCTGGCTACCTCGATATGGACGGCGCCTTTGACGTCATGATGGCCGGCTGCTTTGGCGGTGGAGACATGGATGAGTTCCCTCAAGTGTGGAGGTGATCGATTGGGCAACGTCACGGGGTTATTACCATCCTCTTCAAAGAGGAGAATACATATTGTTCTTACTGGAGACACTGGGTCAGTTAAATCTATTGGTTGTTTAATACACATGGGGATTGGCTGGTAGATTAGAATGGGTTTGAAATGCTGTGAGCTTGACAAGGTTCATTGTGAACGTGAACTATCAGATGTAAATTAATTGGGAAATCCTTTCTTTTCTATATTATTTAGTGTATACAGTTAATTGATAATTGTGCACGTAAAATATTCTATATGCACTGCCGGAATTTGGTT
Zm00001d051140_T001 from maize genome v4
Amino Acid Sequence
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MALREIESTLPPGFRFYPSDEELVCHYLHKKVANERIAQGTLVEVDLHAREPWELPEVAKLTATEWYFFSFRDRKYATGS
RTNRATRTGYWKATGKDREVRSSSSATAVVVGMRKTLVFYRGRAPNGVKSGWVMHEFRLDTPHSPPREDWVLCRVFQKTK
AADGDGDGGAQDGDSSSPPAAFTGPSRPRAVSEPPDHSAPPAGGGYYYGLAFGPRQVEVAQQQCYGGGGATVADHHHGFT
RDSGGAAGFGATWGGGVAGGECGAGYLDMDGAFDVMMAGCFGGGDMDEFPQVWR
Nucleotide Sequence
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GGTCACACACATACTTGTTGTATAC...
GGTCACACACATACTTGTTGTATACCGCCTTTGTTCGGAGAGAATCATCGAGTCGGATAGAGTCCAGGGCTCCAGGCGCTGCGTACTGATCGAAGAGGCGTGTCTCTTCGATCGACCTCCAGGCTTCCAGCTAGCTAGCTAGCGAGCGATGGCATTGAGGGAGATCGAGTCGACGCTGCCACCGGGGTTCAGGTTCTACCCGAGCGACGAGGAGCTGGTGTGCCACTACCTCCACAAGAAGGTGGCCAACGAGCGCATCGCGCAGGGGACGCTCGTCGAGGTGGACCTGCACGCCCGCGAGCCGTGGGAGCTCCCAGAGGTGGCGAAGCTGACGGCCACCGAGTGGTACTTCTTCAGCTTCCGGGACCGCAAGTACGCCACGGGGTCGCGCACCAACCGCGCCACCAGGACGGGCTACTGGAAGGCCACGGGCAAGGACCGCGAGGTGCGCAGCAGCAGCAGCGCCACCGCCGTCGTCGTCGGCATGCGCAAGACGCTCGTCTTCTACCGGGGCAGGGCCCCCAACGGCGTCAAGTCCGGCTGGGTCATGCACGAGTTCCGCCTCGACACCCCGCATTCGCCGCCAAGGGAGGACTGGGTGCTGTGCAGGGTGTTCCAGAAGACGAAAGCCGCCGACGGCGACGGCGATGGCGGCGCCCAAGACGGCGACTCCTCGTCCCCGCCGGCCGCCTTCACCGGCCCGTCACGGCCACGCGCCGTGTCAGAGCCGCCGGACCATTCCGCGCCGCCGGCGGGAGGAGGCTACTACTACGGCCTCGCGTTCGGGCCGCGGCAGGTGGAGGTGGCGCAGCAGCAGTGTTACGGCGGCGGCGGCGCCACGGTCGCCGACCACCACCACGGCTTCACGCGAGACAGCGGGGGCGCTGCAGGGTTTGGCGCGACGTGGGGAGGAGGAGTCGCCGGCGGTGAGTGCGGGGCTGGCTACCTCGATATGGACGGCGCCTTTGACGTCATGATGGCCGGCTGCTTTGGCGGTGGAGACATGGATGAGTTCCCTCAAGTGTGGAGGTGATCGATTGGGCAACGTCACGGGGTTATTACCATCCTCTTCAAAGAGGAGAATACATATTGTTCTTACTGGAGACACTGGGTCAGTTAAATCTATTGGTTGTTTAATACACATGGGGATTGGCTGGTAGATTAGAATGGGTTTGAAATGCTGTGAGCTTGACAAGGTTCATTGTGAACGTGAACTATCAGATGTAAATTAATTGGGAAATCCTTTCTTTTCTATATTATTTAGTGTATACAGTTAATTGATAATTGTGCACGTAAAATATTCTATATGCACTGCCGGAATTTGGTTC
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